1. How many cells does this dataset contain?
\n", "2. How many genes does this dataset contain?
\n", "3. Which categories of sample annotation are present?
\n", "4. Do we have different batchs ? Are they equilibrated ?
\n", "5. How many cells are from each Donor? Is it an equal distribution?
\n", "\n", " | CELL | \n", "CONDITION | \n", "sample_type | \n", "donor | \n", "tenx_lane | \n", "cohort | \n", "batch | \n", "sampleid | \n", "timepoint | \n", "percent_mito | \n", "
---|---|---|---|---|---|---|---|---|---|---|
10X_CiteSeq_donor256.AAACCTGAGAGCCCAA-1 | \n", "10X_CiteSeq_donor256.AAACCTGAGAGCCCAA-1 | \n", "PBMC_healthy | \n", "PBMC | \n", "donor256 | \n", "H1B1ln1 | \n", "H1N1 | \n", "1 | \n", "256 | \n", "d0 | \n", "0.041481 | \n", "
10X_CiteSeq_donor273.AAACCTGAGGCGTACA-1 | \n", "10X_CiteSeq_donor273.AAACCTGAGGCGTACA-1 | \n", "PBMC_healthy | \n", "PBMC | \n", "donor273 | \n", "H1B1ln1 | \n", "H1N1 | \n", "1 | \n", "273 | \n", "d0 | \n", "0.049020 | \n", "
10X_CiteSeq_donor256.AAACCTGCAGGTGGAT-1 | \n", "10X_CiteSeq_donor256.AAACCTGCAGGTGGAT-1 | \n", "PBMC_healthy | \n", "PBMC | \n", "donor256 | \n", "H1B1ln1 | \n", "H1N1 | \n", "1 | \n", "256 | \n", "d0 | \n", "0.017332 | \n", "
10X_CiteSeq_donor200.AAACCTGCAGTATCTG-1 | \n", "10X_CiteSeq_donor200.AAACCTGCAGTATCTG-1 | \n", "PBMC_healthy | \n", "PBMC | \n", "donor200 | \n", "H1B1ln1 | \n", "H1N1 | \n", "1 | \n", "200 | \n", "d0 | \n", "0.017222 | \n", "
10X_CiteSeq_donor233.AAACCTGCATCACAAC-1 | \n", "10X_CiteSeq_donor233.AAACCTGCATCACAAC-1 | \n", "PBMC_healthy | \n", "PBMC | \n", "donor233 | \n", "H1B1ln1 | \n", "H1N1 | \n", "1 | \n", "233 | \n", "d0 | \n", "0.033969 | \n", "
\n", " | Counts | \n", "
---|---|
1 | \n", "30668 | \n", "
2 | \n", "27986 | \n", "