Code Examples

Plotting examples

This is a gallery containing some plotting examples.

Comparing categorical variable

Comparing categorical variable

plotting gene expression

plotting gene expression

quality control plots

quality control plots

Visualize cell fractions

Visualize cell fractions

filtering functions

filtering functions

Preprocessing

This section highlights some of the features of the preprocessing functions included within BESCA.

performing filtering using besca

performing filtering using besca

cluster generation

cluster generation

Tools

This section contains all examples related to besca tools.

reclustering on specific leiden clusters

reclustering on specific leiden clusters

Workflows

Demonstration workflows showing you how to peform certain tasks

Annotate celltypes

Annotate celltypes